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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3293511_3294387_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3293511 - 3294387

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTACCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTCTTTTACCT

Flanking Amino Acid:

TQVVHSQPTPGSVKAPAKTE

Intron Amino Acid Position:

765

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.1

0.65

0.8

71.1

34.9

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

60.3

0.4

1.6

76.22

Associated Gene:

Gene:

PLCB1

Ensembl Gene ID:

ENSAPLG00000012885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013477

3217190 - 3379623

162434