Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_32940255_32940785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32940255 - 32940785

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACTTATT

5'SS Class:

major

3'SS Sequence:

TTTATCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTGAGATTAATT

Flanking Amino Acid:

PSNASIDKIFGVIGCGYFHS

Intron Amino Acid Position:

2783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

76.6

38.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

79.2

0.66

83.5

31.7

Minor 5ss

40.8

-1

3.1

57.1

42.2

Minor BPS

51.3

0.12

2.1

73.75

43.3

Associated Gene:

Gene:

DNAH8

Ensembl Gene ID:

ENSAPLG00000003458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020957

32907553 - 33023858

116306

ENSAPLT00000003597

32892646 - 33023858

131213