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Intron Name: Anas_platyrhynchos_platyrhynchos_3_32966037_32966736_R


Intron Information:

Intron Rank:
41

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
32966037 - 32966736

Intron Length:
700

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAAGTAC

5'SS Class:
major

3'SS Sequence:
ACTTTCTTTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
ATTTATTTACTT

Flanking Amino Acid:
VHQRDIFDDLVKMHIKSPTD

Intron Amino Acid Position:
1945

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1
65.1
35.2

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
75.8
0.58
1
79.6
32.1

Minor 5ss
36.5
-1.5
3.4
46
44.9

Minor BPS
59.5
0.38
1.8
78.91
37.7

Associated Gene:

Gene:
DNAH8

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32907553 - 33023858
116306

32892646 - 33023858
131213