About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_32971573_32971958_R


Intron Information:

Intron Rank:
35

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
32971573 - 32971958

Intron Length:
386

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACTTCTA

5'SS Class:
major

3'SS Sequence:
TCCATTATTTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
TCTTCCATTATT

Flanking Amino Acid:
LMILGSLLSNRYNAPFKKDI

Intron Amino Acid Position:
1640

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.1
71
40.8

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
75.8
0.58
0.8
73.8
35.4

Minor 5ss
36.8
-1.5
3.2
50.5
45.7

Minor BPS
60.4
0.41
1.9
80.98
40.8

Associated Gene:

Gene:
DNAH8

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32907553 - 33023858
116306

32892646 - 33023858
131213