Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_32979279_32980261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32979279 - 32980261

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TCTTTTTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTCTTGTTATTC

Flanking Amino Acid:

YSFNKLQKKATRIQDELVQV

Intron Amino Acid Position:

1355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

0.75

78.6

Major PPT

86.3

0.82

0.9

87.9

29.4

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

48.6

-0.1

2.2

64.92

41.8

Associated Gene:

Gene:

DNAH8

Ensembl Gene ID:

ENSAPLG00000003458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020957

32907553 - 33023858

116306

ENSAPLT00000003597

32892646 - 33023858

131213