Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_33006555_33007905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33006555 - 33007905

Intron Length:

1351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGTT

5'SS Class:

major

3'SS Sequence:

CTTCACTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TATTTCTTCACT

Flanking Amino Acid:

EIPIVIGKIKECMFLLKEYQ

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

79.1

34.5

Major BPS

76.3

0.65

67.3

39.3

Major PPT

79.6

0.67

0.8

77.2

31.1

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

72.8

0.8

1.7

88.69

36.1

Associated Gene:

Gene:

DNAH8

Ensembl Gene ID:

ENSAPLG00000003458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020957

32907553 - 33023858

116306

ENSAPLT00000003597

32892646 - 33023858

131213