Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_33010442_33015235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33010442 - 33015235

Intron Length:

4794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

ACTCTACTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TTTTTCTCAAAA

Flanking Amino Acid:

VCQPLYNYDLESMTRGIPNL

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

76.5

38.6

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

66.7

0.38

1.1

68.9

35.8

Minor 5ss

41.9

-0.9

2.8

57.5

Minor BPS

68.8

0.58

1.6

80.83

34.3

Associated Gene:

Gene:

DNAH8

Ensembl Gene ID:

ENSAPLG00000003458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003597

32892646 - 33023858

131213

ENSAPLT00000020957

32907553 - 33023858

116306