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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3303124_3305005_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3303124 - 3305005

Intron Length:

1882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGTA

5'SS Class:

major

3'SS Sequence:

TATTTCCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAATGTAGAAAT

Flanking Amino Acid:

WEEETIVFKKVVLPSLACLR

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

73.6

37.4

Major BPS

0.75

78.6

Major PPT

82.2

0.73

0.8

74.6

Minor 5ss

31.2

-2.1

3.3

40.7

45.6

Minor BPS

42.6

-0.4

2.1

61.52

41.6

Associated Gene:

Gene:

PLCB1

Ensembl Gene ID:

ENSAPLG00000012885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013477

3217190 - 3379623

162434