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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33058713_33113461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33058713 - 33113461

Intron Length:

54749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

TTCCCCTCCATA

Flanking Amino Acid:

QSLYFPARVCRYIRIVGTHN

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

78.8

30.8

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

73.6

0.53

0.7

68.7

25.1

Minor 5ss

36.8

-1.5

2.6

42.8

Minor BPS

49.3

-0

64.86

41.9

Associated Gene:

Gene:

BTBD9

Ensembl Gene ID:

ENSAPLG00000002877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002942

33048829 - 33156193

107365