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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3306687_3307568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3306687 - 3307568

Intron Length:

882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATACCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATACTTTTAATA

Flanking Amino Acid:

QMVALNFQTVDLSMQINMGM

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.6

0.46

0.9

63.6

41.9

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

64.4

0.45

1.1

67.51

32.4

Associated Gene:

Gene:

PLCB1

Ensembl Gene ID:

ENSAPLG00000012885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013477

3217190 - 3379623

162434