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Intron Name: Anas_platyrhynchos_platyrhynchos_3_331408_331566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

331408 - 331566

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTGA

5'SS Class:

major

3'SS Sequence:

TTGGGATTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

TTGGGATTAACA

Flanking Amino Acid:

FLMLCVCCSKVTLASGQFEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

68.7

39.1

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

65.2

0.34

1.1

58.8

45.4

Minor 5ss

44.9

-0.5

2.8

55.7

43.1

Minor BPS

50.9

0.02

2.1

68.14

44.3

Associated Gene:

Gene:

JAG1

Ensembl Gene ID:

ENSAPLG00000009296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009806

298130 - 331665

33536