Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_33238787_33254575_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33238787 - 33254575

Intron Length:

15789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTGAATACAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTCCTAAAAT

Flanking Amino Acid:

TTPTKRSCDSDSQSESEASP

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

85.4

31.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.14

1.1

48.5

43.5

Minor 5ss

37.6

-1.4

3.6

57.9

46.7

Minor BPS

75.3

0.87

1.7

93.4

34.6

Associated Gene:

Gene:

ZFAND3

Ensembl Gene ID:

ENSAPLG00000006211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006434

33223687 - 33350959

127273