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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33265762_33319751_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
33265762 - 33319751

Intron Length:
53990

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTAGTAAC

5'SS Class:
strong_major

3'SS Sequence:
TTGGTTTTGATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGAGAT

U12 Branch Point Sequence:
TTGGTTTTGATA

Flanking Amino Acid:
AEKRNPHNEKDFQKKQPDDD

Intron Amino Acid Position:
88

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85
0.83
1.1
82.6
29.9

Major BPS
64
0.35
1.3
60.7
45.9

Major PPT
71.3
0.48
1
68.8
42.1

Minor 5ss
32.4
-2
2.5
37
40.2

Minor BPS
56.6
0.2
1.3
64.35
37.1

Associated Gene:

Gene:
ZFAND3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33223687 - 33350959
127273