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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33497935_33543967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33497935 - 33543967

Intron Length:

46033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

TTCCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CCCTCTTTACCT

Flanking Amino Acid:

PAYSRGQGVYAPAQAQIIHA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

64.8

41.3

Major BPS

0.6

65.6

41.1

Major PPT

78.3

0.64

0.7

72.6

25.8

Minor 5ss

30.1

-2.3

3.5

41.6

45.3

Minor BPS

59.8

0.39

1.7

70.57

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312