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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33546315_33550253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33546315 - 33550253

Intron Length:

3939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTCGT

5'SS Class:

major

3'SS Sequence:

GCCTTCCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TCACTAACAACT

Flanking Amino Acid:

AIKSIRVDVQYLDEPVLTVH

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

65.7

45.7

Major BPS

64.5

0.36

65.2

28.2

Major PPT

78.4

0.64

0.8

37.1

Minor 5ss

37.9

-1.4

3.1

51.2

45.1

Minor BPS

-0.4

1.9

60.84

42.1

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666