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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33553423_33557445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33553423 - 33557445

Intron Length:

4023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAA

5'SS Class:

strong_major

3'SS Sequence:

GGTCCTCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TCCTTTTTAAGC

Flanking Amino Acid:

SITFQLTNTTAPPALKLSVN

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

73.8

32.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

75.7

0.58

0.9

65.6

Minor 5ss

36.1

-1.6

3.2

46.7

48.6

Minor BPS

59.3

0.27

1.6

64.58

42.1

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666