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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33557716_33558084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33557716 - 33558084

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

GTGTTCATCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCTCCCTAAATA

Flanking Amino Acid:

AKKTVNLLVRSMKNATFQIT

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

66.1

40.7

Major BPS

84.8

0.86

85.7

34.9

Major PPT

71.8

0.49

62.8

Minor 5ss

42.5

-0.8

2.8

53.5

43.7

Minor BPS

64.2

0.44

1.7

72.44

40.1

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666