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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33561664_33583832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33561664 - 33583832

Intron Length:

22169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

GTTCGGTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CTGATGACACCC

Flanking Amino Acid:

REALVQLNVQFPPVVEPAFQ

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

76.1

34.8

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

0.4

57.7

43.2

Minor 5ss

35.9

-1.6

2.9

43.1

43.9

Minor BPS

-1.3

2.2

39.21

39.9

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666