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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33584103_33587770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33584103 - 33587770

Intron Length:

3668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CACTCTTTACTT

Flanking Amino Acid:

GVSACLFQVSAKAYSPEFYY

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

0.6

65.6

41.1

Major PPT

94.3

0.5

93.3

15.5

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

0.3

1.6

68.01

43.8

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666