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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33587923_33602916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33587923 - 33602916

Intron Length:

14994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCAATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTCTCTTTCAAT

Flanking Amino Acid:

ILKYRLEVRQLAQRSTIQTF

Intron Amino Acid Position:

657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

76.9

0.67

1.2

31.9

Major PPT

79.5

0.66

0.9

74.7

33.8

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

61.2

0.43

1.9

80.63

41.5

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666