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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33603095_33604183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33603095 - 33604183

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGTTTTTCCATT

Flanking Amino Acid:

MAARIIRYMEPISYPNPTDN

Intron Amino Acid Position:

716

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.3

72.1

39.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

37.2

-1.4

3.6

50.7

39.8

Minor BPS

48.9

-0

1.9

71.95

39.8

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666