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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33611245_33612443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33611245 - 33612443

Intron Length:

1199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGCACA

5'SS Class:

major

3'SS Sequence:

TCTCCTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CTTTCCCCACCT

Flanking Amino Acid:

PPTDISGTPEGYYMFIEASR

Intron Amino Acid Position:

775

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

62.5

43.9

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

76.1

0.59

0.9

72.7

Minor 5ss

37.8

-1.4

3.1

40.8

45.3

Minor BPS

49.6

0.05

2.2

76.94

45.3

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006289

33506454 - 33630119

123666

ENSAPLT00000047551

33497808 - 33630119

132312