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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33612579_33627486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33612579 - 33627486

Intron Length:

14908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

TTCTCCCCTACA

Flanking Amino Acid:

FYYHMYGKHIGSLNLLVRVR

Intron Amino Acid Position:

820

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.3

34.6

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

83.1

0.75

0.7

76.9

25.3

Minor 5ss

-2.1

2.6

39.1

38.9

Minor BPS

48.7

-0.1

2.2

68.81

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666