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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33627618_33628422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33627618 - 33628422

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAG

U12 Branch Point Sequence:

GCAGCTTCACAG

Flanking Amino Acid:

VPINPPGPFQIIFEGVRGTS

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

53.7

0.09

1.5

38.9

Major PPT

0.49

64.5

41.4

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

38.3

-1

1.8

33.96

40.1

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666