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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33628532_33629793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33628532 - 33629793

Intron Length:

1262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGAGTG

5'SS Class:

major

3'SS Sequence:

CCTTGGCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

CCATCACTAATT

Flanking Amino Acid:

CPRKPIGPNKAVALPGNGVP

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

65.9

40.1

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

66.3

0.37

1.1

60.9

40.2

Minor 5ss

28.2

-2.5

3.3

Minor BPS

49.1

0.01

66.6

44.1

Associated Gene:

Gene:

MDGA1

Ensembl Gene ID:

ENSAPLG00000006008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047551

33497808 - 33630119

132312

ENSAPLT00000006289

33506454 - 33630119

123666