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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33651360_33653518_R

Intron Information:

Intron Rank:

145814

Intron Class:

major

Intron Phase:

Intron Coordinates:

33651360 - 33653518

Intron Length:

2159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGATTA

5'SS Class:

strong_major

3'SS Sequence:

CCTCGTGTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

ATTTCTACAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.6

29.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

65.9

0.36

0.9

59.7

35.6

Minor 5ss

36.2

-1.6

3.2

44.1

44.7

Minor BPS

49.4

0.04

2.1

75.59

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023956

33643827 - 33653602

9776