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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33728144_33729549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33728144 - 33729549

Intron Length:

1406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATCACATTT

Flanking Amino Acid:

KPSRPDMNPIRVKEVYRLEE

Intron Amino Acid Position:

887

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.3

0.52

0.9

65.5

36.1

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

-0.4

1.9

62.64

41.4

Associated Gene:

Gene:

CMTR1

Ensembl Gene ID:

ENSAPLG00000014262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014915

33723918 - 33748296

24379