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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33729619_33730294_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33729619 - 33730294

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

TCTAGCTCAATT

Flanking Amino Acid:

NDVRNQHFNQRIQLAEKFVK

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

74.4

41.9

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

85.2

0.79

0.9

84.6

Minor 5ss

41.2

-1

2.5

51.1

45.4

Minor BPS

51.7

0.13

72.72

44.5

Associated Gene:

Gene:

CMTR1

Ensembl Gene ID:

ENSAPLG00000014262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014915

33723918 - 33748296

24379