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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33730387_33731122_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33730387 - 33731122

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

GTTTACGTATTA

Flanking Amino Acid:

VEIVHELKGEGKAQRKISAI

Intron Amino Acid Position:

834

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.9

41.1

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

85.6

0.8

81.1

30.6

Minor 5ss

32.4

-2

3.2

43.2

Minor BPS

46.4

-0.2

2.3

64.93

41.7

Associated Gene:

Gene:

CMTR1

Ensembl Gene ID:

ENSAPLG00000014262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014915

33723918 - 33748296

24379