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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33731246_33731721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33731246 - 33731721

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

CTTCTCTACACA

Flanking Amino Acid:

SEQKFLLGLGKSQIYTWDGR

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

77.1

0.61

0.8

72.4

31.3

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

47.9

-0.1

2.1

63.68

43.1

Associated Gene:

Gene:

CMTR1

Ensembl Gene ID:

ENSAPLG00000014262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014915

33723918 - 33748296

24379