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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33733657_33734059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33733657 - 33734059

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCATCTCTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGCTCCCTGACT

Flanking Amino Acid:

FYDYIVQSNENHCKVQIKAL

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

75.6

0.58

0.8

73.3

31.4

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

65.8

0.58

1.7

81.14

40.4

Associated Gene:

Gene:

CMTR1

Ensembl Gene ID:

ENSAPLG00000014262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014915

33723918 - 33748296

24379