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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33734943_33736171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33734943 - 33736171

Intron Length:

1229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GCTGGTGTCACT

Flanking Amino Acid:

FLTALSIVRTGGHFVCKTFD

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.6

32.9

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.4

0.62

0.9

68.8

37.2

Minor 5ss

41.8

-0.9

59.5

44.9

Minor BPS

37.6

-0.9

2.5

55.14

47.4

Associated Gene:

Gene:

CMTR1

Ensembl Gene ID:

ENSAPLG00000014262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014915

33723918 - 33748296

24379