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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33736623_33738366_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33736623 - 33738366

Intron Length:

1744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

ACGTTAGTAATC

Flanking Amino Acid:

ASSELFEPYYGEGGIDGDGD

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

76.2

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

75.4

0.57

0.7

73.7

24.6

Minor 5ss

43.7

-0.7

2.6

56.9

42.5

Minor BPS

44.4

-0.4

2.1

52.71

39.5

Associated Gene:

Gene:

CMTR1

Ensembl Gene ID:

ENSAPLG00000014262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014915

33723918 - 33748296

24379