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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33777998_33779473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33777998 - 33779473

Intron Length:

1476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAA

U12 Branch Point Sequence:

CGCACCTGAAGT

Flanking Amino Acid:

IAVTGRQAKQAREVGQCLAV

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

60.8

0.27

51.3

35.5

Major PPT

81.8

0.71

0.7

76.4

25.7

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

48.5

-0

1.9

62.21

47.1

Associated Gene:

Gene:

AARS2

Ensembl Gene ID:

ENSAPLG00000014835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022455

33765595 - 33789144

23550