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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33863038_33863126_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33863038 - 33863126

Intron Length:
89

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGCGGC

5'SS Class:
major

3'SS Sequence:
TCCGTCCCCATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCAGCAT

U12 Branch Point Sequence:
CCACCCAGCATC

Flanking Amino Acid:
VAEEHYLSATIQERLEELQS

Intron Amino Acid Position:
481

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.2
0.67
1.1
61.8
43.5

Major BPS
45.4
-0.2
1.4
51.3
42.7

Major PPT
67.3
0.39
0.8
61.2
29.3

Minor 5ss
37.2
-1.5
3.4
50.7
46

Minor BPS
38.7
-0.9
1.9
42.3
38.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33856636 - 33865933
9298

33856636 - 33865933
9298