Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_33863305_33863487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33863305 - 33863487

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CATGCGCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TGTCCCTGAGCC

Flanking Amino Acid:

RHFFRDYLAMISWTEDTRAQ

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

74.4

36.1

Major BPS

0.62

1.1

77.2

Major PPT

63.7

0.31

0.9

58.3

38.1

Minor 5ss

34.5

-1.8

3.3

44.7

43.5

Minor BPS

57.6

0.22

1.7

70.35

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042512

33856636 - 33865933

9298

ENSAPLT00000038153

33856636 - 33865933

9298