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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33864214_33864311_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33864214 - 33864311

Intron Length:
98

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAGGGGGG

5'SS Class:
major

3'SS Sequence:
CCCTCCTGCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GACTCAC

U12 Branch Point Sequence:
TGGGACTCACCT

Flanking Amino Acid:
AAETESLERLVAAVSPRLEA

Intron Amino Acid Position:
296

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.2
0.45
1.1
52.4
41.8

Major BPS
59.5
0.24
1.2
63.3
35.6

Major PPT
68
0.41
0.9
60.1
35.4

Minor 5ss
27.4
-2.6
3.7
34
44.2

Minor BPS
44.5
-0.3
2
61.86
47.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33856636 - 33865933
9298

33856636 - 33865933
9298