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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33875429_33875962_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

33875429 - 33875962

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATCCTCT

5'SS Class:

strong_minor

3'SS Sequence:

CCTGTGCTCCCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

TTCTCCTTGACC

Flanking Amino Acid:

SCRNMVNLMDKDGSARLGLV

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.3

41.7

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

70.6

0.46

0.9

60.8

40.2

Minor 5ss

86.8

1.24

1.3

87.1

27.7

Minor BPS

84.3

1.06

85.95

32.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016429

33784461 - 33882522

98062

ENSAPLT00000005446

33873756 - 33882522

8767