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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33876180_33876564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33876180 - 33876564

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTATG

5'SS Class:

strong_major

3'SS Sequence:

GCTGCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GTGCTGCTAACA

Flanking Amino Acid:

KNMFQQLAGEDMEISVFELR

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

69.2

0.43

61.5

Minor 5ss

32.5

-2

3.1

41.1

45.5

Minor BPS

44.4

-0.4

2.3

57.89

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005446

33873756 - 33882522

8767

ENSAPLT00000016429

33784461 - 33882522

98062