Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_33877572_33877651_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33877572 - 33877651

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCAC

5'SS Class:

major

3'SS Sequence:

TCCTTCCTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GGTATCTCACCC

Flanking Amino Acid:

STAGGCRNHPATFWINPQFK

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

63.4

43.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

81.2

0.7

76.3

25.7

Minor 5ss

-1.2

3.1

52.9

44.2

Minor BPS

46.8

-0.2

1.8

56.8

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016429

33784461 - 33882522

98062

ENSAPLT00000005446

33873756 - 33882522

8767