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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33879505_33879590_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33879505 - 33879590

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTTGG

5'SS Class:

major

3'SS Sequence:

TGATGACTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

ACGGGTTTAACT

Flanking Amino Acid:

HAYSVTAFRDVNYRGQQEQL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.8

39.9

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

61.1

0.25

1.1

55.2

44.6

Minor 5ss

36.6

-1.5

2.9

44.8

43.4

Minor BPS

50.8

0.1

1.9

65.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016429

33784461 - 33882522

98062

ENSAPLT00000005446

33873756 - 33882522

8767