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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33880506_33880591_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33880506 - 33880591

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

GCCCCGCGCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

ATCGCCTCACAT

Flanking Amino Acid:

WSALLEKAYAKLNGCYEALS

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

68.6

36.4

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

57.2

0.16

52.9

36.7

Minor 5ss

31.8

-2.1

2.8

37.4

33.2

Minor BPS

-0.2

63.65

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016429

33784461 - 33882522

98062

ENSAPLT00000005446

33873756 - 33882522

8767