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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33882031_33882239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33882031 - 33882239

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CGCCCTCTGATT

Flanking Amino Acid:

TRGVEWKRPSELVGDPQFIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

79.1

37.5

Major BPS

0.72

38.9

Major PPT

79.1

0.65

0.7

72.8

25.4

Minor 5ss

0.04

2.8

74.4

41.8

Minor BPS

46.2

-0.2

1.6

57.46

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016429

33784461 - 33882522

98062

ENSAPLT00000005446

33873756 - 33882522

8767