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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33894500_33894714_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33894500 - 33894714

Intron Length:
215

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTGAGTAGT

5'SS Class:
major

3'SS Sequence:
TCTCTCTGCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GAGTGAC

U12 Branch Point Sequence:
TCTCTCTGCACA

Flanking Amino Acid:
SSVDFDQRDNGFCSWLTAIF

Intron Amino Acid Position:
142

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1.2
77.8
38.7

Major BPS
48.3
-0.1
1.3
40.8
41.4

Major PPT
76.1
0.59
0.9
71.5
32.9

Minor 5ss
33.4
-1.9
2.8
41.6
38.2

Minor BPS
49.4
-0
1.9
65.1
41.3

Associated Gene:

Gene:
TMEM63B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33886213 - 33907219
21007

33884914 - 33910150
25237

33884914 - 33898623
13710

33884914 - 33910150
25237