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Intron Name: Anas_platyrhynchos_platyrhynchos_3_33898624_33909995_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
33898624 - 33909995

Intron Length:
11372

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTGAGCGCT

5'SS Class:
major

3'SS Sequence:
CTCCCTCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTAAC

U12 Branch Point Sequence:
AGGCACCTAACC

Flanking Amino Acid:
GSPEPSAPGPGEDDEAVEML

Intron Amino Acid Position:
52

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1
65.8
40.2

Major BPS
63.2
0.33
1
63.6
30.5

Major PPT
73.5
0.53
0.7
65
30.7

Minor 5ss
33.1
-1.9
3.4
39.6
45.9

Minor BPS
47.7
-0.1
1.9
57.5
40.2

Associated Gene:

Gene:
TMEM63B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33884914 - 33910150
25237

33884914 - 33910150
25237