Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_34092119_34093228_R

Intron Information:

Intron Rank:

151915

Intron Class:

major

Intron Phase:

Intron Coordinates:

34092119 - 34093228

Intron Length:

1110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTATG

5'SS Class:

major

3'SS Sequence:

GTGTTGTTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

TGTTGTTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.3

74.5

41.9

Major BPS

64.7

0.37

31.5

Major PPT

0.29

1.1

62.7

42.4

Minor 5ss

34.9

-1.7

2.7

40.3

39.5

Minor BPS

47.2

-0.3

2.1

57.62

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032734

34091336 - 34093883

2548