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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34202146_34204409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34202146 - 34204409

Intron Length:

2264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGTC

5'SS Class:

major

3'SS Sequence:

TCCTCTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCTT

U12 Branch Point Sequence:

TCCTCTCTGACA

Flanking Amino Acid:

RQLELNERTCRCEKPRR*

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

73.5

35.7

Major BPS

34.1

-1

4.2

71.4

36.6

Major PPT

75.3

0.57

0.9

71.7

32.9

Minor 5ss

39.7

-1.2

3.1

52.8

44.4

Minor BPS

56.9

0.21

1.7

66.6

40.3

Associated Gene:

Gene:

VEGFA

Ensembl Gene ID:

ENSAPLG00000025704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042711

34201124 - 34222461

21338

ENSAPLT00000034485

34201124 - 34222461

21338

ENSAPLT00000021112

34201124 - 34222461

21338