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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34204542_34205704_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34204542 - 34205704

Intron Length:

1163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTACGTTTG

5'SS Class:

major

3'SS Sequence:

TGCCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGACAT

U12 Branch Point Sequence:

GTAGCTTAGACA

Flanking Amino Acid:

RKKGRYKPPSFHCEPCSERR

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.1

64.6

41.9

Major BPS

59.8

0.24

1.2

39.8

Major PPT

84.8

0.78

0.8

79.8

32.1

Minor 5ss

45.3

-0.5

3.1

63.4

42.5

Minor BPS

48.7

-0.1

1.8

59.23

40.9

Associated Gene:

Gene:

VEGFA

Ensembl Gene ID:

ENSAPLG00000025704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042711

34201124 - 34222461

21338