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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34401975_34402663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34401975 - 34402663

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCAGTG

5'SS Class:

major

3'SS Sequence:

GCTTCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCAGTAT

U12 Branch Point Sequence:

AGCTGGGCAGCC

Flanking Amino Acid:

RIEISDKEIEDLHRRLDQAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.2

44.1

Major BPS

41.9

-0.5

1.5

33.7

42.4

Major PPT

79.9

0.67

0.8

73.5

31.5

Minor 5ss

38.5

-1.3

3.6

55.8

48.4

Minor BPS

28.2

-1.6

2.5

37.18

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025764

34398573 - 34409195

10623

ENSAPLT00000017047

34399504 - 34409195

9692