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Intron Name: Anas_platyrhynchos_platyrhynchos_3_34402845_34403617_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34402845 - 34403617

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TGATGTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATCTCTTTGATG

Flanking Amino Acid:

KYPHFHTTIEGIDIHFIHVK

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

66.7

0.38

1.1

62.1

44.2

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

64.9

0.32

1.3

63.95

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017047

34399504 - 34409195

9692

ENSAPLT00000025764

34398573 - 34409195

10623